lin28b protein (Takifugu rubripes) - STRING interaction network

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[Homology]

Score

lin28b

Lin-28 homolog B (C. elegans). (230 aa)

Predicted Functional Partners:

znf143

0.660

ncbp2

0.553

hmga2

0.544

polr2f

0.542

snrpd3

0.530

drosha

0.526

rps11

0.517

snrpf

0.513

snrpg

0.506

hnrnpk

0.478

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
drosha	lin28b	ENSTRUP00000059490	ENSTRUP00000085780	Drosha ribonuclease III.	Lin-28 homolog B (C. elegans).	0.526
drosha	polr2f	ENSTRUP00000059490	ENSTRUP00000055440	Drosha ribonuclease III.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.510
drosha	rps11	ENSTRUP00000059490	ENSTRUP00000068429	Drosha ribonuclease III.	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.680
hmga2	lin28b	ENSTRUP00000085993	ENSTRUP00000085780	Uncharacterized protein.	Lin-28 homolog B (C. elegans).	0.544
hnrnpk	lin28b	ENSTRUP00000063053	ENSTRUP00000085780	Heterogeneous nuclear ribonucleoprotein K.	Lin-28 homolog B (C. elegans).	0.478
hnrnpk	ncbp2	ENSTRUP00000063053	ENSTRUP00000075961	Heterogeneous nuclear ribonucleoprotein K.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.704
hnrnpk	polr2f	ENSTRUP00000063053	ENSTRUP00000055440	Heterogeneous nuclear ribonucleoprotein K.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.528
hnrnpk	snrpd3	ENSTRUP00000063053	ENSTRUP00000072646	Heterogeneous nuclear ribonucleoprotein K.	Small nuclear ribonucleoprotein Sm D3.	0.415
lin28b	drosha	ENSTRUP00000085780	ENSTRUP00000059490	Lin-28 homolog B (C. elegans).	Drosha ribonuclease III.	0.526
lin28b	hmga2	ENSTRUP00000085780	ENSTRUP00000085993	Lin-28 homolog B (C. elegans).	Uncharacterized protein.	0.544
lin28b	hnrnpk	ENSTRUP00000085780	ENSTRUP00000063053	Lin-28 homolog B (C. elegans).	Heterogeneous nuclear ribonucleoprotein K.	0.478
lin28b	ncbp2	ENSTRUP00000085780	ENSTRUP00000075961	Lin-28 homolog B (C. elegans).	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.553
lin28b	polr2f	ENSTRUP00000085780	ENSTRUP00000055440	Lin-28 homolog B (C. elegans).	Polymerase (RNA) II (DNA directed) polypeptide F.	0.542
lin28b	rps11	ENSTRUP00000085780	ENSTRUP00000068429	Lin-28 homolog B (C. elegans).	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.517
lin28b	snrpd3	ENSTRUP00000085780	ENSTRUP00000072646	Lin-28 homolog B (C. elegans).	Small nuclear ribonucleoprotein Sm D3.	0.530
lin28b	snrpf	ENSTRUP00000085780	ENSTRUP00000038228	Lin-28 homolog B (C. elegans).	Small nuclear ribonucleoprotein polypeptide F.	0.513
lin28b	snrpg	ENSTRUP00000085780	ENSTRUP00000009580	Lin-28 homolog B (C. elegans).	Small nuclear ribonucleoprotein G.	0.506
lin28b	znf143	ENSTRUP00000085780	ENSTRUP00000023452	Lin-28 homolog B (C. elegans).	Selenocysteine tRNA activating factor.	0.660
ncbp2	hnrnpk	ENSTRUP00000075961	ENSTRUP00000063053	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Heterogeneous nuclear ribonucleoprotein K.	0.704
ncbp2	lin28b	ENSTRUP00000075961	ENSTRUP00000085780	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Lin-28 homolog B (C. elegans).	0.553