STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101078012Gonadal soma derived factor; Belongs to the TGF-beta family. (215 aa)    
Predicted Functional Partners:
amh
TGF_BETA_2 domain-containing protein.
      
 0.751
dmrt1
DM domain-containing protein.
      
 0.603
pfcyp19a
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
  
 0.566
amhr2
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
   
 0.514
LOC101075863
Cytochrome P450, family 11, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family.
      
 0.463
Sf1
Splicing factor 1.
      
 0.450
bmp15
Bone morphogenetic protein 15.
      
 0.443
LOC101076404
Zgc:194189.
     
 0.426
LOC101064242
R-spondin 1.
   
 0.415
hsd17b1
Hydroxysteroid (17-beta) dehydrogenase 1.
      
 0.402
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.