Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSTRUP00000058147 | nbn | ENSTRUP00000058147 | ENSTRUP00000087062 | annotation not available | Nibrin. | 0.486 |
H2UN29_TAKRU | nbn | ENSTRUP00000064289 | ENSTRUP00000087062 | AA_TRNA_LIGASE_II domain-containing protein. | Nibrin. | 0.486 |
LOC101068426 | LOC101077004 | ENSTRUP00000007981 | ENSTRUP00000005496 | Threonyl-tRNA synthetase-like 2. | Threonyl-tRNA synthetase. | 0.901 |
LOC101068426 | nbn | ENSTRUP00000007981 | ENSTRUP00000087062 | Threonyl-tRNA synthetase-like 2. | Nibrin. | 0.486 |
LOC101077004 | LOC101068426 | ENSTRUP00000005496 | ENSTRUP00000007981 | Threonyl-tRNA synthetase. | Threonyl-tRNA synthetase-like 2. | 0.901 |
LOC101077004 | nbn | ENSTRUP00000005496 | ENSTRUP00000087062 | Threonyl-tRNA synthetase. | Nibrin. | 0.486 |
atm | mre11 | ENSTRUP00000088348 | ENSTRUP00000034547 | TAN domain-containing protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.998 |
atm | nbn | ENSTRUP00000088348 | ENSTRUP00000087062 | TAN domain-containing protein. | Nibrin. | 0.902 |
atm | rad50 | ENSTRUP00000088348 | ENSTRUP00000008687 | TAN domain-containing protein. | RAD50 homolog, double strand break repair protein. | 0.997 |
mre11 | atm | ENSTRUP00000034547 | ENSTRUP00000088348 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | TAN domain-containing protein. | 0.998 |
mre11 | nbn | ENSTRUP00000034547 | ENSTRUP00000087062 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Nibrin. | 0.900 |
mre11 | rad50 | ENSTRUP00000034547 | ENSTRUP00000008687 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | RAD50 homolog, double strand break repair protein. | 0.999 |
nbn | ENSTRUP00000058147 | ENSTRUP00000087062 | ENSTRUP00000058147 | Nibrin. | annotation not available | 0.486 |
nbn | H2UN29_TAKRU | ENSTRUP00000087062 | ENSTRUP00000064289 | Nibrin. | AA_TRNA_LIGASE_II domain-containing protein. | 0.486 |
nbn | LOC101068426 | ENSTRUP00000087062 | ENSTRUP00000007981 | Nibrin. | Threonyl-tRNA synthetase-like 2. | 0.486 |
nbn | LOC101077004 | ENSTRUP00000087062 | ENSTRUP00000005496 | Nibrin. | Threonyl-tRNA synthetase. | 0.486 |
nbn | atm | ENSTRUP00000087062 | ENSTRUP00000088348 | Nibrin. | TAN domain-containing protein. | 0.902 |
nbn | mre11 | ENSTRUP00000087062 | ENSTRUP00000034547 | Nibrin. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.900 |
nbn | pigl | ENSTRUP00000087062 | ENSTRUP00000001630 | Nibrin. | Phosphatidylinositol glycan anchor biosynthesis, class L. | 0.483 |
nbn | pigv | ENSTRUP00000087062 | ENSTRUP00000034446 | Nibrin. | GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis. | 0.496 |
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