STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000087094annotation not available (405 aa)    
Predicted Functional Partners:
RAG2
Recombination-activating protein 2.
   
 0.756
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.556
ENSTRUP00000077381
annotation not available
 
     0.520
ENSTRUP00000066257
annotation not available
 
     0.506
rpl21
Ribosomal protein L21.
   
   0.493
ENSTRUP00000061728
annotation not available
 
     0.483
bard1
BRCA1 associated RING domain 1.
    
 0.464
rpl13a
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.448
rpl8
Ribosomal protein L8.
   
 
 0.429
babam1
BRISC and BRCA1 A complex member 1.
    
 0.427
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.