STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101071822Nudix (nucleoside diphosphate linked moiety X)-type motif 6. (312 aa)    
Predicted Functional Partners:
adad1
Adenosine deaminase domain containing 1 (testis-specific).
      
 0.540
ADAD1
Adenosine deaminase domain containing 1.
      
 0.540
Fgfbp2
Fibroblast growth factor binding protein 2b.
      
 0.524
SPATA5
ATPase family protein 2 homolog.
      
 0.523
ANKRD50
Ankyrin repeat domain 50.
      
 0.515
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
      
 0.489
ENSTRUP00000056992
Nanos homolog 1; Belongs to the nanos family.
      
 0.476
LOC101071373
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
   
  
 0.463
fgfbp1
Fibroblast growth factor binding protein 1b.
      
 0.453
FAT4
FAT atypical cadherin 4.
      
 0.453
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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