STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000087641Neurotrophin-4-like. (213 aa)    
Predicted Functional Partners:
LOC101078202
Tyrosine-protein kinase receptor.
    
 0.736
ntrk1
Tyrosine-protein kinase receptor.
    
 0.736
ntrk3
Neurotrophic tyrosine kinase, receptor, type 3b; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.736
ENSTRUP00000063292
BDNF/NT-3 growth factors receptor-like isoform X1.
    
 0.736
H2TI00_TAKRU
Tyrosine-protein kinase receptor.
    
 0.736
H2V4V2_TAKRU
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
    
0.702
LOC101073275
Nerve growth factor receptor b.
    
 
 0.694
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.669
LOC101078112
Sortilin.
    
 
 0.571
LOC101073281
Sortilin.
    
 
 0.571
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.