STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000087740annotation not available (406 aa)    
Predicted Functional Partners:
nsun6
NOP2/Sun RNA methyltransferase 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.497
slc30a1
Uncharacterized protein.
  
 0.454
sod2
Superoxide dismutase 2, mitochondrial.
  
  
 0.447
slc30a7
Solute carrier family 30 member 7.
  
 0.437
slc30a4
Solute carrier family 30 member 4.
   
 0.436
slc30a5
Solute carrier family 30 member 5.
  
 0.435
SLC39A3
Uncharacterized protein.
   
 0.426
slc39a1
Zinc transporter ZIP1; Mediates zinc uptake.
   
 0.426
sdr39u1
Short chain dehydrogenase/reductase family 39U, member 1.
  
    0.404
slc30a9
Solute carrier family 30 member 9.
  
  
 0.404
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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