Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSTRUP00000059190 | tll1 | ENSTRUP00000059190 | ENSTRUP00000087895 | Kell metallo-endopeptidase (Kell blood group). | Metalloendopeptidase. | 0.504 |
LOC101071206 | tll1 | ENSTRUP00000079456 | ENSTRUP00000087895 | Procollagen C-endopeptidase enhancer b. | Metalloendopeptidase. | 0.495 |
LOC101072553 | chrd | ENSTRUP00000042706 | ENSTRUP00000073223 | Sizzled. | Chordin. | 0.747 |
LOC101072553 | tll1 | ENSTRUP00000042706 | ENSTRUP00000087895 | Sizzled. | Metalloendopeptidase. | 0.626 |
LOC101077796 | tll1 | ENSTRUP00000015602 | ENSTRUP00000087895 | Procollagen C-endopeptidase enhancer 2. | Metalloendopeptidase. | 0.495 |
LOC115248663 | tll1 | ENSTRUP00000063407 | ENSTRUP00000087895 | Kell blood group glycoprotein-like isoform X1. | Metalloendopeptidase. | 0.504 |
chrd | LOC101072553 | ENSTRUP00000073223 | ENSTRUP00000042706 | Chordin. | Sizzled. | 0.747 |
chrd | tll1 | ENSTRUP00000073223 | ENSTRUP00000087895 | Chordin. | Metalloendopeptidase. | 0.742 |
edar | lef1 | ENSTRUP00000087249 | ENSTRUP00000073083 | Ectodysplasin A receptor. | Lymphoid enhancer-binding factor 1. | 0.711 |
edar | smc3 | ENSTRUP00000087249 | ENSTRUP00000017046 | Ectodysplasin A receptor. | Structural maintenance of chromosomes protein. | 0.576 |
edar | tll1 | ENSTRUP00000087249 | ENSTRUP00000087895 | Ectodysplasin A receptor. | Metalloendopeptidase. | 0.576 |
edar | yap1 | ENSTRUP00000087249 | ENSTRUP00000053107 | Ectodysplasin A receptor. | Yes-associated protein 1. | 0.622 |
lef1 | edar | ENSTRUP00000073083 | ENSTRUP00000087249 | Lymphoid enhancer-binding factor 1. | Ectodysplasin A receptor. | 0.711 |
lef1 | smc3 | ENSTRUP00000073083 | ENSTRUP00000017046 | Lymphoid enhancer-binding factor 1. | Structural maintenance of chromosomes protein. | 0.566 |
lef1 | tll1 | ENSTRUP00000073083 | ENSTRUP00000087895 | Lymphoid enhancer-binding factor 1. | Metalloendopeptidase. | 0.503 |
lef1 | yap1 | ENSTRUP00000073083 | ENSTRUP00000053107 | Lymphoid enhancer-binding factor 1. | Yes-associated protein 1. | 0.503 |
smc3 | edar | ENSTRUP00000017046 | ENSTRUP00000087249 | Structural maintenance of chromosomes protein. | Ectodysplasin A receptor. | 0.576 |
smc3 | lef1 | ENSTRUP00000017046 | ENSTRUP00000073083 | Structural maintenance of chromosomes protein. | Lymphoid enhancer-binding factor 1. | 0.566 |
smc3 | tll1 | ENSTRUP00000017046 | ENSTRUP00000087895 | Structural maintenance of chromosomes protein. | Metalloendopeptidase. | 0.584 |
smc3 | yap1 | ENSTRUP00000017046 | ENSTRUP00000053107 | Structural maintenance of chromosomes protein. | Yes-associated protein 1. | 0.755 |
page 1 of 2