STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOMM20Uncharacterized protein. (167 aa)    
Predicted Functional Partners:
tomm22
Translocase of outer mitochondrial membrane 22 homolog (yeast).
   
 0.949
tomm70
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
   
 0.943
TOMM7
Translocase of outer mitochondrial membrane 7.
   
 0.902
LOC101061276
Translocase of outer mitochondrial membrane 40 homolog, like.
   
 0.850
TOMM40
Mitochondrial import receptor subunit TOM40 homolog.
   
 0.850
LOC101070918
Uncharacterized protein.
   
 0.850
usp30
Ubiquitin carboxyl-terminal hydrolase.
    
 0.796
LOC101078311
Si:ch73-22o12.1.
   
 0.755
LOC101074231
PVR cell adhesion molecule related 2 like.
   
 0.755
pink1
PTEN induced kinase 1.
    
 0.752
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.