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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA6Spermatogenesis-associated protein 6. (472 aa)    
Predicted Functional Partners:
CNTLN
Centlein isoform X1.
      
 0.663
SPATA18
Mitochondria-eating protein isoform X2.
      
 0.624
SUN5
SUN domain-containing protein 5.
      
 0.624
GMCL1
Germ cell-less protein-like 1.
      
 0.621
FAM214B
Protein FAM214B.
      
 0.618
TMEM87B
Transmembrane protein 87B.
      
 0.617
C2CD5
C2 domain-containing protein 5 isoform X1.
      
 0.614
QRICH1
Glutamine-rich protein 1.
      
 0.613
ZNHIT1
Zinc finger HIT domain-containing protein 1.
      
 0.605
RHNO1
RAD9, HUS1, RAD1-interacting nuclear orphan protein 1.
      
 0.600
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.