Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BSDC1 | HPSE | A0A384A5B4 | A0A383YYQ7 | BSD domain-containing protein 1 isoform X1. | Heparanase isoform X1. | 0.622 |
BSDC1 | SDC1 | A0A384A5B4 | A0A384A887 | BSD domain-containing protein 1 isoform X1. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.659 |
GPC1 | HPSE | A0A384ACF6 | A0A383YYQ7 | Glypican-1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Heparanase isoform X1. | 0.444 |
GPC1 | HPSE2 | A0A384ACF6 | A0A384AJQ5 | Glypican-1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Inactive heparanase-2 isoform X1. | 0.498 |
GPC1 | SDC1 | A0A384ACF6 | A0A384A887 | Glypican-1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.978 |
GPC1 | SDC3 | A0A384ACF6 | A0A383Z623 | Glypican-1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.636 |
HPSE | BSDC1 | A0A383YYQ7 | A0A384A5B4 | Heparanase isoform X1. | BSD domain-containing protein 1 isoform X1. | 0.622 |
HPSE | GPC1 | A0A383YYQ7 | A0A384ACF6 | Heparanase isoform X1. | Glypican-1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.444 |
HPSE | HPSE2 | A0A383YYQ7 | A0A384AJQ5 | Heparanase isoform X1. | Inactive heparanase-2 isoform X1. | 0.903 |
HPSE | IDS | A0A383YYQ7 | A0A452CEN0 | Heparanase isoform X1. | Iduronate 2-sulfatase. | 0.901 |
HPSE | NAMPT | A0A383YYQ7 | A0A384A0U9 | Heparanase isoform X1. | Nicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family. | 0.441 |
HPSE | SDC1 | A0A383YYQ7 | A0A384A887 | Heparanase isoform X1. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.966 |
HPSE | SDC3 | A0A383YYQ7 | A0A383Z623 | Heparanase isoform X1. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.447 |
HPSE | TM6SF1 | A0A383YYQ7 | A0A384B3W5 | Heparanase isoform X1. | Transmembrane 6 superfamily member 1 isoform X1. | 0.440 |
HPSE | TNFAIP8L3 | A0A383YYQ7 | A0A452C8Q5 | Heparanase isoform X1. | Tumor necrosis factor alpha-induced protein 8-like protein 3. | 0.440 |
HPSE | VSTM2B | A0A383YYQ7 | A0A383YQL8 | Heparanase isoform X1. | V-set and transmembrane domain-containing protein 2B. | 0.617 |
HPSE2 | GPC1 | A0A384AJQ5 | A0A384ACF6 | Inactive heparanase-2 isoform X1. | Glypican-1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.498 |
HPSE2 | HPSE | A0A384AJQ5 | A0A383YYQ7 | Inactive heparanase-2 isoform X1. | Heparanase isoform X1. | 0.903 |
HPSE2 | IDS | A0A384AJQ5 | A0A452CEN0 | Inactive heparanase-2 isoform X1. | Iduronate 2-sulfatase. | 0.901 |
HPSE2 | SDC1 | A0A384AJQ5 | A0A384A887 | Inactive heparanase-2 isoform X1. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.972 |
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