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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSIG8V-set and immunoglobulin domain-containing protein 8. (444 aa)    
Predicted Functional Partners:
LRRC15
Leucine-rich repeat-containing protein 15.
    
 0.771
B4GALT4
Beta-1,4-galactosyltransferase 4.
      
 0.700
SPC24
Kinetochore protein Spc24.
      
 0.684
GPRC5D
G-protein coupled receptor family C group 5 member D.
     
 0.594
ZBED9
LOW QUALITY PROTEIN: SCAN domain-containing protein 3.
   
 0.568
FOXN1
Forkhead box protein N1.
    
 
 0.556
LOC103021003
Fibroblast growth factor-binding protein 1.
      
 0.539
PRR9
LOW QUALITY PROTEIN: proline-rich protein 9.
   
  
 0.521
PBRM1
Protein polybromo-1 isoform X1.
    
 
 0.453
LOC103003201
LOW QUALITY PROTEIN: keratin, type I cytoskeletal 16; Belongs to the intermediate filament family.
   
 0.433
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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