Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADCK5 | CPSF1 | A0A383YW23 | A0A383YVK5 | Uncharacterized aarF domain-containing protein kinase 5 isoform X1. | Cleavage and polyadenylation specificity factor subunit 1. | 0.619 |
ADCK5 | EML3 | A0A383YW23 | A0A383ZH46 | Uncharacterized aarF domain-containing protein kinase 5 isoform X1. | Echinoderm microtubule-associated protein-like 3 isoform X1. | 0.624 |
BUB3 | EML3 | A0A383ZE31 | A0A383ZH46 | Mitotic checkpoint protein BUB3 isoform X1. | Echinoderm microtubule-associated protein-like 3 isoform X1. | 0.588 |
BUB3 | ERCC6L | A0A383ZE31 | A0A384ADV8 | Mitotic checkpoint protein BUB3 isoform X1. | DNA excision repair protein ERCC-6-like. | 0.579 |
BUB3 | LOC102998734 | A0A383ZE31 | A0A384AIS1 | Mitotic checkpoint protein BUB3 isoform X1. | E3 SUMO-protein ligase RanBP2 isoform X1. | 0.745 |
BUB3 | MAD2L1 | A0A383ZE31 | A0A383ZC79 | Mitotic checkpoint protein BUB3 isoform X1. | Mitotic spindle assembly checkpoint protein MAD2A. | 0.998 |
CPSF1 | ADCK5 | A0A383YVK5 | A0A383YW23 | Cleavage and polyadenylation specificity factor subunit 1. | Uncharacterized aarF domain-containing protein kinase 5 isoform X1. | 0.619 |
CPSF1 | EML3 | A0A383YVK5 | A0A383ZH46 | Cleavage and polyadenylation specificity factor subunit 1. | Echinoderm microtubule-associated protein-like 3 isoform X1. | 0.642 |
CPSF1 | LOC102998734 | A0A383YVK5 | A0A384AIS1 | Cleavage and polyadenylation specificity factor subunit 1. | E3 SUMO-protein ligase RanBP2 isoform X1. | 0.564 |
EML3 | ADCK5 | A0A383ZH46 | A0A383YW23 | Echinoderm microtubule-associated protein-like 3 isoform X1. | Uncharacterized aarF domain-containing protein kinase 5 isoform X1. | 0.624 |
EML3 | BUB3 | A0A383ZH46 | A0A383ZE31 | Echinoderm microtubule-associated protein-like 3 isoform X1. | Mitotic checkpoint protein BUB3 isoform X1. | 0.588 |
EML3 | CPSF1 | A0A383ZH46 | A0A383YVK5 | Echinoderm microtubule-associated protein-like 3 isoform X1. | Cleavage and polyadenylation specificity factor subunit 1. | 0.642 |
EML3 | ERCC6L | A0A383ZH46 | A0A384ADV8 | Echinoderm microtubule-associated protein-like 3 isoform X1. | DNA excision repair protein ERCC-6-like. | 0.749 |
EML3 | GAS2L3 | A0A383ZH46 | A0A383YSN2 | Echinoderm microtubule-associated protein-like 3 isoform X1. | GAS2-like protein 3. | 0.612 |
EML3 | LAS1L | A0A383ZH46 | A0A384AFY6 | Echinoderm microtubule-associated protein-like 3 isoform X1. | Ribosomal biogenesis protein LAS1L isoform X1. | 0.644 |
EML3 | LOC102998734 | A0A383ZH46 | A0A384AIS1 | Echinoderm microtubule-associated protein-like 3 isoform X1. | E3 SUMO-protein ligase RanBP2 isoform X1. | 0.616 |
EML3 | MAD2L1 | A0A383ZH46 | A0A383ZC79 | Echinoderm microtubule-associated protein-like 3 isoform X1. | Mitotic spindle assembly checkpoint protein MAD2A. | 0.623 |
EML3 | SHCBP1 | A0A383ZH46 | A0A383YYG0 | Echinoderm microtubule-associated protein-like 3 isoform X1. | SHC SH2 domain-binding protein 1 isoform X1. | 0.597 |
EML3 | WDR76 | A0A383ZH46 | A0A452C576 | Echinoderm microtubule-associated protein-like 3 isoform X1. | WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family. | 0.604 |
ERCC6L | BUB3 | A0A384ADV8 | A0A383ZE31 | DNA excision repair protein ERCC-6-like. | Mitotic checkpoint protein BUB3 isoform X1. | 0.579 |
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