close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF186E3 ubiquitin-protein ligase RNF186. (226 aa)    
Predicted Functional Partners:
SVOPL
Putative transporter SVOPL.
      
 0.681
OTUD3
OTU domain-containing protein 3 isoform X1.
      
 0.673
LOC103000811
Phospholipase A(2).
      
 0.646
BTNL2
Butyrophilin-like protein 2.
    
 
 0.597
PUS10
Putative tRNA pseudouridine synthase Pus10 isoform X1.
      
 0.592
UBE2H
Ubiquitin-conjugating enzyme E2 H isoform X2; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.540
RNF182
E3 ubiquitin-protein ligase RNF182.
      
 0.539
PSMG1
Proteasome assembly chaperone 1; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with psmg2.
   
  
 0.515
KBTBD3
Kelch repeat and BTB domain-containing protein 3.
    
 
 0.508
KIF21B
Kinesin-like protein KIF21B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.507
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.