STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103011917Zinc finger protein 28 homolog isoform X1. (866 aa)    
Predicted Functional Partners:
LIMCH1
LOW QUALITY PROTEIN: LIM and calponin homology domains-containing protein 1.
    
 
 0.600
TRAM1L1
Translocating chain-associated membrane protein; Belongs to the TRAM family.
      
 0.495
RUNDC3B
RUN domain-containing protein 3B isoform X1.
      
 0.485
EPS8L2
Epidermal growth factor receptor kinase substrate 8-like protein 2.
    
 
 0.443
TMEM182
Transmembrane protein 182 isoform X1.
     
 0.440
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.