STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MARCH10Probable E3 ubiquitin-protein ligase MARCH10. (812 aa)    
Predicted Functional Partners:
UBA7
Ubiquitin-like modifier-activating enzyme 7 isoform X1; Belongs to the ubiquitin-activating E1 family.
    
 
 0.705
CFAP100
Cilia- and flagella-associated protein 100.
   
  
 0.704
UBA1
Ubiquitin-like modifier-activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
    
 
 0.703
RAD18
E3 ubiquitin-protein ligase RAD18 isoform X1.
   
  
 0.703
QRICH1
Glutamine-rich protein 1.
      
 0.693
EFCAB3
EF-hand calcium-binding domain-containing protein 3.
  
  
 0.675
LOC103005823
Ubiquitin-conjugating enzyme E2 A; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.673
MARCH3
E3 ubiquitin-protein ligase MARCH3.
      
 0.666
RXFP2
Relaxin receptor 2.
    
 
 0.663
USP2
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
      
 0.645
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.