STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF28Rho guanine nucleotide exchange factor 28 isoform X1. (1761 aa)    
Predicted Functional Partners:
RHOA
Transforming protein RhoA.
   
 0.986
PTK2
Focal adhesion kinase 1 isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 
 0.965
PTK2B
Protein-tyrosine kinase 2-beta isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 
 0.950
ARHGEF12
Rho guanine nucleotide exchange factor 12 isoform X1.
   
0.930
ARHGEF1
Rho guanine nucleotide exchange factor 1 isoform X1.
   
0.928
LOC103018216
Guanine nucleotide-binding protein G(Q) subunit alpha.
    
 0.903
RHOC
Rho-related GTP-binding protein RhoC.
   
 0.825
RHOB
Rho-related GTP-binding protein RhoB.
   
 0.825
NOL8
Nucleolar protein 8 isoform X1.
      
 0.624
PLPPR2
Phospholipid phosphatase-related protein type 2 isoform X1.
      
 0.591
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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