Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQR | CLEC16A | A0A383ZZZ1 | A0A384AMQ4 | RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. | Protein CLEC16A isoform X1. | 0.606 |
AQR | WDR44 | A0A383ZZZ1 | A0A383ZTJ6 | RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. | WD repeat-containing protein 44. | 0.723 |
CLEC16A | AQR | A0A384AMQ4 | A0A383ZZZ1 | Protein CLEC16A isoform X1. | RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. | 0.606 |
CLEC16A | WDR44 | A0A384AMQ4 | A0A383ZTJ6 | Protein CLEC16A isoform X1. | WD repeat-containing protein 44. | 0.608 |
MAL2 | WDR44 | A0A384ANB2 | A0A383ZTJ6 | Protein MAL2. | WD repeat-containing protein 44. | 0.591 |
RAB11FIP4 | WDR44 | A0A452CMX5 | A0A383ZTJ6 | Rab11 family-interacting protein 4. | WD repeat-containing protein 44. | 0.541 |
RAB3GAP1 | RAB3GAP2 | A0A384AXU2 | A0A383ZA82 | Rab3 GTPase-activating protein catalytic subunit isoform X1. | Rab3 GTPase-activating protein non-catalytic subunit isoform X1. | 0.999 |
RAB3GAP1 | VAPA | A0A384AXU2 | A0A384B992 | Rab3 GTPase-activating protein catalytic subunit isoform X1. | Vesicle-associated membrane protein-associated protein A. | 0.445 |
RAB3GAP1 | VAPB | A0A384AXU2 | A0A384ADC9 | Rab3 GTPase-activating protein catalytic subunit isoform X1. | Vesicle-associated membrane protein-associated protein B/C isoform X1. | 0.450 |
RAB3GAP1 | WDR44 | A0A384AXU2 | A0A383ZTJ6 | Rab3 GTPase-activating protein catalytic subunit isoform X1. | WD repeat-containing protein 44. | 0.682 |
RAB3GAP2 | RAB3GAP1 | A0A383ZA82 | A0A384AXU2 | Rab3 GTPase-activating protein non-catalytic subunit isoform X1. | Rab3 GTPase-activating protein catalytic subunit isoform X1. | 0.999 |
RAB3GAP2 | RABGEF1 | A0A383ZA82 | A0A384AGW6 | Rab3 GTPase-activating protein non-catalytic subunit isoform X1. | Rab5 GDP/GTP exchange factor isoform X1. | 0.449 |
RAB3GAP2 | VAPA | A0A383ZA82 | A0A384B992 | Rab3 GTPase-activating protein non-catalytic subunit isoform X1. | Vesicle-associated membrane protein-associated protein A. | 0.467 |
RAB3GAP2 | VAPB | A0A383ZA82 | A0A384ADC9 | Rab3 GTPase-activating protein non-catalytic subunit isoform X1. | Vesicle-associated membrane protein-associated protein B/C isoform X1. | 0.472 |
RAB3GAP2 | WDR44 | A0A383ZA82 | A0A383ZTJ6 | Rab3 GTPase-activating protein non-catalytic subunit isoform X1. | WD repeat-containing protein 44. | 0.701 |
RABGEF1 | RAB3GAP2 | A0A384AGW6 | A0A383ZA82 | Rab5 GDP/GTP exchange factor isoform X1. | Rab3 GTPase-activating protein non-catalytic subunit isoform X1. | 0.449 |
RABGEF1 | WDR44 | A0A384AGW6 | A0A383ZTJ6 | Rab5 GDP/GTP exchange factor isoform X1. | WD repeat-containing protein 44. | 0.696 |
TBC1D14 | WDR44 | A0A452C9S0 | A0A383ZTJ6 | LOW QUALITY PROTEIN: TBC1 domain family member 14. | WD repeat-containing protein 44. | 0.525 |
VAPA | RAB3GAP1 | A0A384B992 | A0A384AXU2 | Vesicle-associated membrane protein-associated protein A. | Rab3 GTPase-activating protein catalytic subunit isoform X1. | 0.445 |
VAPA | RAB3GAP2 | A0A384B992 | A0A383ZA82 | Vesicle-associated membrane protein-associated protein A. | Rab3 GTPase-activating protein non-catalytic subunit isoform X1. | 0.467 |
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