STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCA3ATP-binding cassette sub-family A member 3. (1703 aa)    
Predicted Functional Partners:
SFTPB
Pulmonary surfactant-associated protein B isoform X1.
      
 0.671
SFTPC
Pulmonary surfactant-associated protein C isoform X1.
      
 0.651
LPCAT1
Lysophosphatidylcholine acyltransferase 1 isoform X1.
   
 
 0.625
AQP5
Aquaporin-5; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
  
 0.575
PCYT1A
Choline-phosphate cytidylyltransferase A.
      
 0.534
LOC103013544
Pulmonary surfactant-associated protein A.
      
 0.495
HOPX
Homeodomain-only protein.
   
  
 0.446
PROSER3
Proline and serine-rich protein 3 isoform X1.
     
 0.417
IQCC
IQ domain-containing protein C isoform X1.
      
 0.414
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.