STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LEMD1LEM domain-containing protein 1. (183 aa)    
Predicted Functional Partners:
TSGA10
Testis-specific gene 10 protein.
      
 0.592
SPATA19
Spermatogenesis-associated protein 19, mitochondrial.
      
 0.590
ZBTB7C
Zinc finger and BTB domain-containing protein 7C.
      
 0.582
COL25A1
Collagen alpha-1(XXV) chain isoform X1.
      
 0.549
LEPROT
Leptin receptor gene-related protein.
      
 0.523
PSIP1
PC4 and SFRS1-interacting protein isoform X1.
      
 0.507
SRPX2
Sushi repeat-containing protein SRPX2.
      
 0.504
ODF3
Outer dense fiber protein 3.
      
 0.439
SHOX
Short stature homeobox protein.
      
 0.438
COCH
Cochlin isoform X1.
      
 0.438
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.