STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA4Fsemaphorin-4F; Belongs to the semaphorin family. (771 aa)    
Predicted Functional Partners:
PLXNB1
plexin-B1.
   
 0.959
PLXNB2
plexin-B2.
   
 0.957
MST1R
Macrophage-stimulating protein receptor.
  
 
 0.700
MET
Hepatocyte growth factor receptor isoform X1.
    
 0.610
PLXND1
plexin-D1.
    
 0.582
RND3
Rho-related GTP-binding protein RhoE isoform X1.
    
 0.542
NRP1
Neuropilin; Belongs to the neuropilin family.
    
 0.519
PCGF1
Polycomb group RING finger protein 1.
    
 
 0.509
PLEKHA5
Pleckstrin homology domain-containing family A member 5.
      
 0.507
EPHB6
Ephrin type-B receptor 6.
   
 0.474
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.