STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARFGEF1Brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1. (1649 aa)    
Predicted Functional Partners:
ARL1
ADP-ribosylation factor-like protein 1 isoform X1; Belongs to the small GTPase superfamily. Arf family.
    
 0.770
TMEM208
Transmembrane protein 208 isoform X1.
      
 0.694
FBXL8
F-box/LRR-repeat protein 8.
     
 0.691
ATP13A1
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
   
 
 0.632
NMT1
Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family.
   
  
 0.599
SGSM3
Small G protein signaling modulator 3.
      
 0.593
UBR5
E3 ubiquitin-protein ligase UBR5.
   
    0.569
ARFGEF2
Brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1.
  
  
0.554
ARL6
ADP-ribosylation factor-like protein 6 isoform X1; Belongs to the small GTPase superfamily. Arf family.
    
 0.552
ARF3
ADP-ribosylation factor 3; Belongs to the small GTPase superfamily. Arf family.
    
 0.552
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.