STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD2BP2CD2 antigen cytoplasmic tail-binding protein 2. (340 aa)    
Predicted Functional Partners:
SNRNP200
U5 small nuclear ribonucleoprotein 200 kDa helicase.
   
 
 0.948
TXNL4A
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
 0.932
DDX23
Probable ATP-dependent RNA helicase DDX23.
   
 
 0.898
PRPF8
pre-mRNA-processing-splicing factor 8.
    
 
 0.881
PRPF6
pre-mRNA-processing factor 6.
   
 
 0.846
TXNL4B
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
 0.804
TSSC4
Protein TSSC4.
    
 
 0.793
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
    
 
 0.793
SNRPN
Small nuclear ribonucleoprotein-associated protein.
    
 
 0.779
SART1
U4/U6.U5 tri-snRNP-associated protein 1.
   
 
 0.765
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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