STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103018792Oligophrenin-1-like. (347 aa)    
Predicted Functional Partners:
OPHN1
Oligophrenin-1.
 
     0.925
LOC103005583
Oligophrenin-1-like.
 
      0.892
RHOA
Transforming protein RhoA.
    
 0.451
PAQR5
Membrane progestin receptor gamma isoform X1.
   
  
 0.451
GINM1
Glycoprotein integral membrane protein 1.
      
 0.441
ZC4H2
Zinc finger C4H2 domain-containing protein isoform X1.
      
 0.440
PJA1
E3 ubiquitin-protein ligase Praja-1 isoform X1.
      
 0.438
ARHGEF6
Rho guanine nucleotide exchange factor 6.
      
 0.432
CDC42
Cell division control protein 42 homolog isoform X2.
    
 0.426
S100A5
Protein S100-A5.
      
 0.426
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.