Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CD40LG | LCK | A0A384A8Q8 | A0A383Z669 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Tyrosine-protein kinase. | 0.411 |
CD40LG | TNFRSF11B | A0A384A8Q8 | A0A384ANG0 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Tumor necrosis factor receptor superfamily member 11B; Acts as decoy receptor for TNFSF11/RANKL and thereby neutralizes its function in osteoclastogenesis. | 0.656 |
CD40LG | TNFSF11 | A0A384A8Q8 | A0A384AI09 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Tumor necrosis factor ligand superfamily member 11; Belongs to the tumor necrosis factor family. | 0.603 |
CTSK | GRB2 | A0A383ZSJ1 | A0A384AEP8 | Cathepsin K isoform X1; Belongs to the peptidase C1 family. | Growth factor receptor-bound protein 2. | 0.746 |
CTSK | LCK | A0A383ZSJ1 | A0A383Z669 | Cathepsin K isoform X1; Belongs to the peptidase C1 family. | Tyrosine-protein kinase. | 0.759 |
CTSK | TGFB2 | A0A383ZSJ1 | A0A383ZFF2 | Cathepsin K isoform X1; Belongs to the peptidase C1 family. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.713 |
CTSK | TNFRSF11B | A0A383ZSJ1 | A0A384ANG0 | Cathepsin K isoform X1; Belongs to the peptidase C1 family. | Tumor necrosis factor receptor superfamily member 11B; Acts as decoy receptor for TNFSF11/RANKL and thereby neutralizes its function in osteoclastogenesis. | 0.729 |
CTSK | TNFSF11 | A0A383ZSJ1 | A0A384AI09 | Cathepsin K isoform X1; Belongs to the peptidase C1 family. | Tumor necrosis factor ligand superfamily member 11; Belongs to the tumor necrosis factor family. | 0.725 |
GRB2 | CTSK | A0A384AEP8 | A0A383ZSJ1 | Growth factor receptor-bound protein 2. | Cathepsin K isoform X1; Belongs to the peptidase C1 family. | 0.746 |
GRB2 | LCK | A0A384AEP8 | A0A383Z669 | Growth factor receptor-bound protein 2. | Tyrosine-protein kinase. | 0.730 |
GRB2 | PIK3CB | A0A384AEP8 | A0A383Z5Q4 | Growth factor receptor-bound protein 2. | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform; Belongs to the PI3/PI4-kinase family. | 0.532 |
GRB2 | TGFB2 | A0A384AEP8 | A0A383ZFF2 | Growth factor receptor-bound protein 2. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.691 |
GRB2 | TNFRSF11B | A0A384AEP8 | A0A384ANG0 | Growth factor receptor-bound protein 2. | Tumor necrosis factor receptor superfamily member 11B; Acts as decoy receptor for TNFSF11/RANKL and thereby neutralizes its function in osteoclastogenesis. | 0.649 |
GRB2 | TNFSF11 | A0A384AEP8 | A0A384AI09 | Growth factor receptor-bound protein 2. | Tumor necrosis factor ligand superfamily member 11; Belongs to the tumor necrosis factor family. | 0.652 |
LCK | CD40LG | A0A383Z669 | A0A384A8Q8 | Tyrosine-protein kinase. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.411 |
LCK | CTSK | A0A383Z669 | A0A383ZSJ1 | Tyrosine-protein kinase. | Cathepsin K isoform X1; Belongs to the peptidase C1 family. | 0.759 |
LCK | GRB2 | A0A383Z669 | A0A384AEP8 | Tyrosine-protein kinase. | Growth factor receptor-bound protein 2. | 0.730 |
LCK | PIK3CB | A0A383Z669 | A0A383Z5Q4 | Tyrosine-protein kinase. | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform; Belongs to the PI3/PI4-kinase family. | 0.495 |
LCK | TGFB2 | A0A383Z669 | A0A383ZFF2 | Tyrosine-protein kinase. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.786 |
LCK | TNFRSF11B | A0A383Z669 | A0A384ANG0 | Tyrosine-protein kinase. | Tumor necrosis factor receptor superfamily member 11B; Acts as decoy receptor for TNFSF11/RANKL and thereby neutralizes its function in osteoclastogenesis. | 0.720 |
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