STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFR3AProtein EFR3 homolog A isoform X1. (821 aa)    
Predicted Functional Partners:
TTC7A
Tetratricopeptide repeat protein 7A isoform X1.
   
 
 0.852
PI4KA
Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family.
   
 
 0.787
TTC7B
Tetratricopeptide repeat protein 7B isoform X1.
   
 
 0.765
SYT6
Synaptotagmin-6 isoform X1.
   
  
 0.600
SPOCD1
SPOC domain-containing protein 1 isoform X1.
      
 0.591
NECAB1
N-terminal EF-hand calcium-binding protein 1.
      
 0.590
NECAB3
LOW QUALITY PROTEIN: N-terminal EF-hand calcium-binding protein 3.
      
 0.590
FAM126A
Hyccin isoform X1.
      
 0.588
TMEM150A
Transmembrane protein 150A isoform X2.
      
 0.519
WDR24
GATOR complex protein WDR24 isoform X1.
      
 0.508
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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