STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHISA8Protein shisa-8. (241 aa)    
Predicted Functional Partners:
LDLRAD1
Low-density lipoprotein receptor class A domain-containing protein 1.
      
 0.769
SNTN
Sentan.
      
 0.704
CDHR3
Cadherin-related family member 3.
      
 0.693
MCIDAS
Multicilin.
      
 0.670
FOXN4
Forkhead box protein N4.
      
 0.590
ANO1
Anoctamin.
      
 0.499
HTR1F
5-hydroxytryptamine receptor 1F.
      
 0.497
SMOC2
SPARC-related modular calcium-binding protein 2.
      
 0.439
GALNT6
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.438
CCNO
cyclin-O; Belongs to the cyclin family.
      
 0.438
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.