STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAND1SCAN domain-containing protein 1. (179 aa)    
Predicted Functional Partners:
ZNF322
Zinc finger protein 322.
      
 0.709
LOC103006184
Cytochrome c oxidase assembly protein COX19.
    
 
 0.604
LOC103004775
AP-3 complex subunit sigma-2.
      
 0.603
UTP3
Something about silencing protein 10.
      
 0.601
TAF5L
TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L.
    
 0.582
PGBD1
piggyBac transposable element-derived protein 1.
    
  
0.528
ZSCAN20
Zinc finger and SCAN domain-containing protein 20.
    
  
0.513
TUFT1
Tuftelin isoform X5.
      
 0.511
TLNRD1
LOW QUALITY PROTEIN: talin rod domain-containing protein 1.
     
 0.510
FITM2
Fat storage-inducing transmembrane protein 2 isoform X1.
      
 0.508
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.