STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF5Protein YIPF. (257 aa)    
Predicted Functional Partners:
YIF1B
Protein YIF1B isoform X1.
   
 
 0.835
YIPF2
Protein YIPF.
   
 
 0.775
YIPF1
Protein YIPF.
   
 
 0.713
TMEM167A
Protein kish; Involved in the early part of the secretory pathway.
   
    0.657
DERL1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
   
 0.635
YIF1A
Protein YIF1A isoform X1.
   
 
 0.606
RAB1A
Ras-related protein Rab-1A.
   
 
 0.549
RAB1B
Ras-related protein Rab-1B isoform X1.
   
 
 0.546
SYVN1
E3 ubiquitin-protein ligase synoviolin.
    
 
 0.540
YIPF6
Protein YIPF.
      
 0.522
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.