STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB21Ras-related protein Rab-21. (222 aa)    
Predicted Functional Partners:
RABGEF1
Rab5 GDP/GTP exchange factor isoform X1.
   
 0.982
DENND1B
DENN domain-containing protein 1B isoform X1.
      
 0.754
ANKRD27
Ankyrin repeat domain-containing protein 27 isoform X1.
   
 0.739
DENND1C
DENN domain-containing protein 1C.
      
 0.696
GAPVD1
LOW QUALITY PROTEIN: GTPase-activating protein and VPS9 domain-containing protein 1.
   
 0.686
PI4KB
Phosphatidylinositol 4-kinase beta isoform X1; Belongs to the PI3/PI4-kinase family.
      
 0.629
TBC1D17
TBC1 domain family member 17.
   
  
 0.619
GDI2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.601
GDI1
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.601
EEA1
Early endosome antigen 1.
      
 0.600
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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