STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRBReceptor-type tyrosine-protein phosphatase beta isoform X1. (2213 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1.
    
 0.921
SEMA3E
semaphorin-3E; Belongs to the semaphorin family.
   
 0.802
THBS1
Thrombospondin-1.
    
 0.774
TBC1D31
TBC1 domain family member 31 isoform X1.
      
 0.734
MFN2
Mitofusin-2 isoform X1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
      
 0.700
MST1R
Macrophage-stimulating protein receptor.
    
 0.665
MET
Hepatocyte growth factor receptor isoform X1.
    
 0.665
CDH5
Cadherin-5 isoform X1; Cadherins are calcium-dependent cell adhesion proteins.
   
 0.662
ADGRF5
Adhesion G protein-coupled receptor F5 isoform X1; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.598
NOL10
Nucleolar protein 10 isoform X1.
      
 0.590
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.