Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COL1A1 | COL1A2 | A0A452CCU1 | A0A384B8F5 | LOW QUALITY PROTEIN: collagen alpha-1(I) chain. | Collagen alpha-2(I) chain. | 0.999 |
COL1A1 | COL3A1 | A0A452CCU1 | A0A384B955 | LOW QUALITY PROTEIN: collagen alpha-1(I) chain. | Collagen alpha-1(III) chain. | 0.996 |
COL1A1 | COL5A2 | A0A452CCU1 | A0A384BA75 | LOW QUALITY PROTEIN: collagen alpha-1(I) chain. | Collagen alpha-2(V) chain isoform X1. | 0.903 |
COL1A1 | COL6A1 | A0A452CCU1 | A0A383ZC41 | LOW QUALITY PROTEIN: collagen alpha-1(I) chain. | LOW QUALITY PROTEIN: collagen alpha-1(VI) chain. | 0.950 |
COL1A1 | DCN | A0A452CCU1 | A0A383YTC2 | LOW QUALITY PROTEIN: collagen alpha-1(I) chain. | Decorin; May affect the rate of fibrils formation. | 0.721 |
COL1A1 | GP6 | A0A452CCU1 | A0A384A252 | LOW QUALITY PROTEIN: collagen alpha-1(I) chain. | Platelet glycoprotein VI. | 0.910 |
COL1A1 | ITGA2 | A0A452CCU1 | A0A384B7K0 | LOW QUALITY PROTEIN: collagen alpha-1(I) chain. | Integrin alpha-2; Belongs to the integrin alpha chain family. | 0.955 |
COL1A1 | ITGB1 | A0A452CCU1 | A0A384ARG3 | LOW QUALITY PROTEIN: collagen alpha-1(I) chain. | Integrin beta; Belongs to the integrin beta chain family. | 0.950 |
COL1A1 | LUM | A0A452CCU1 | A0A383YSX4 | LOW QUALITY PROTEIN: collagen alpha-1(I) chain. | Lumican. | 0.760 |
COL1A1 | PCOLCE | A0A452CCU1 | A0A384AH61 | LOW QUALITY PROTEIN: collagen alpha-1(I) chain. | Procollagen C-endopeptidase enhancer 1 isoform X1. | 0.678 |
COL1A2 | COL1A1 | A0A384B8F5 | A0A452CCU1 | Collagen alpha-2(I) chain. | LOW QUALITY PROTEIN: collagen alpha-1(I) chain. | 0.999 |
COL1A2 | COL3A1 | A0A384B8F5 | A0A384B955 | Collagen alpha-2(I) chain. | Collagen alpha-1(III) chain. | 0.996 |
COL1A2 | COL5A2 | A0A384B8F5 | A0A384BA75 | Collagen alpha-2(I) chain. | Collagen alpha-2(V) chain isoform X1. | 0.918 |
COL1A2 | COL6A1 | A0A384B8F5 | A0A383ZC41 | Collagen alpha-2(I) chain. | LOW QUALITY PROTEIN: collagen alpha-1(VI) chain. | 0.783 |
COL1A2 | DCN | A0A384B8F5 | A0A383YTC2 | Collagen alpha-2(I) chain. | Decorin; May affect the rate of fibrils formation. | 0.885 |
COL1A2 | GP6 | A0A384B8F5 | A0A384A252 | Collagen alpha-2(I) chain. | Platelet glycoprotein VI. | 0.901 |
COL1A2 | ITGA2 | A0A384B8F5 | A0A384B7K0 | Collagen alpha-2(I) chain. | Integrin alpha-2; Belongs to the integrin alpha chain family. | 0.932 |
COL1A2 | ITGB1 | A0A384B8F5 | A0A384ARG3 | Collagen alpha-2(I) chain. | Integrin beta; Belongs to the integrin beta chain family. | 0.951 |
COL1A2 | LUM | A0A384B8F5 | A0A383YSX4 | Collagen alpha-2(I) chain. | Lumican. | 0.988 |
COL1A2 | PCOLCE | A0A384B8F5 | A0A384AH61 | Collagen alpha-2(I) chain. | Procollagen C-endopeptidase enhancer 1 isoform X1. | 0.722 |
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