STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103007745LOW QUALITY PROTEIN: protocadherin beta-7. (799 aa)    
Predicted Functional Partners:
ZP4
Zona pellucida sperm-binding protein 4 isoform X1.
    
 0.763
ARHGEF4
LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 4.
      
 0.755
SCNN1D
LOW QUALITY PROTEIN: amiloride-sensitive sodium channel subunit delta; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
      
 0.752
PPIP5K1
Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase; Bifunctional inositol kinase that acts in concert with the IP6K kinases IP6K1, IP6K2 and IP6K3 to synthesize the diphosphate group-containing inositol pyrophosphates diphosphoinositol pentakisphosphate, PP-InsP5, and bis-diphosphoinositol tetrakisphosphate, (PP)2-InsP4. PP-InsP5 and (PP)2-InsP4, also respectively called InsP7 and InsP8, regulate a variety of cellular processes, including apoptosis, vesicle trafficking, cytoskeletal dynamics, exocytosis, insulin signaling and neutrophil activation. Phosphorylates [...]
      
 0.707
CDK10
LOW QUALITY PROTEIN: cyclin-dependent kinase 10; Belongs to the protein kinase superfamily.
      
 0.668
UBE2H
Ubiquitin-conjugating enzyme E2 H isoform X2; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.659
EMC1
ER membrane protein complex subunit 1 isoform X1.
      
 0.621
CCSAP
Centriole, cilia and spindle-associated protein.
      
 0.592
MYOM2
Myomesin-2.
    
 
 0.550
CNTN6
Contactin-6 isoform X1.
    
 
 0.525
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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