STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103004507Copine-5. (290 aa)    
Predicted Functional Partners:
LOC114235950
Copine-5-like.
 
     0.937
CPNE4
Copine-4.
 
    0.691
ATAD3A
ATPase family AAA domain-containing protein 3A.
      
 0.598
TMBIM6
Bax inhibitor 1; Belongs to the BI1 family.
      
 0.514
RNASEH2B
Ribonuclease H2 subunit B isoform X1.
   
 
 0.479
GPR149
Probable G-protein coupled receptor 149.
   
  
 0.459
LOC103009780
Myosin-3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  
 0.452
PHACTR1
Phosphatase and actin regulator.
      
 0.437
RBM15
RNA-binding protein 15.
      
 0.435
RNASEH2A
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.422
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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