STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM33RNA-binding protein 33. (1270 aa)    
Predicted Functional Partners:
TESPA1
Protein TESPA1.
      
 0.763
RNF34
E3 ubiquitin-protein ligase RNF34.
      
 0.715
TNK2
LOW QUALITY PROTEIN: activated CDC42 kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.714
USP24
Ubiquitin carboxyl-terminal hydrolase 24 isoform X2; Belongs to the peptidase C19 family.
   
 
 0.706
FGGY
FGGY carbohydrate kinase domain-containing protein.
   
 0.638
SAMD11
Sterile alpha motif domain-containing protein 11 isoform X1.
      
 0.632
PGBD5
piggyBac transposable element-derived protein 5.
   
 
 0.631
FAM83C
Protein FAM83C.
      
 0.621
DNAJC21
dnaJ homolog subfamily C member 21.
      
 0.619
ASCC3
LOW QUALITY PROTEIN: activating signal cointegrator 1 complex subunit 3.
      
 0.616
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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