STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103013068Retinol dehydrogenase 12-like. (156 aa)    
Predicted Functional Partners:
FDX1
Adrenodoxin, mitochondrial.
   
 0.605
RLBP1
Retinaldehyde-binding protein 1.
    
 0.572
TULP1
Tubby-like protein; Belongs to the TUB family.
   
  
 0.542
LOC103008068
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
 
 0.523
RDH8
Retinol dehydrogenase 8; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.520
RPGRIP1
LOW QUALITY PROTEIN: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1.
   
  
 0.519
AIPL1
Aryl-hydrocarbon-interacting protein-like 1.
      
 0.516
CEP290
Centrosomal protein of 290 kDa.
    
 
 0.513
LOC103017836
Dehydrogenase/reductase SDR family member 4 isoform X1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.512
RD3
Protein RD3.
      
 0.508
Your Current Organism:
Balaenoptera acutorostrata
NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni
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