STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN27666.1Signal transduction histidine kinase. (410 aa)    
Predicted Functional Partners:
SEN27690.1
Two component transcriptional regulator, LuxR family.
 
 0.986
SEO13865.1
Two component transcriptional regulator, LuxR family.
 
 0.942
SEN39272.1
Signal transduction histidine kinase.
  
 0.901
SEN37856.1
Two component transcriptional regulator, LuxR family.
 
 0.898
SEN90853.1
Signal transduction histidine kinase.
  
  
 0.844
SEO78104.1
Two component transcriptional regulator, LuxR family.
 
 0.818
SEN75507.1
Two component transcriptional regulator, LuxR family.
 
 0.803
SEO86847.1
Signal transduction histidine kinase.
  
  
  0.794
SEN37607.1
Signal transduction histidine kinase.
  
  
  0.793
SEN27721.1
Hypothetical protein.
  
    0.791
Your Current Organism:
Streptomyces rubidus
NCBI taxonomy Id: 310780
Other names: CGMCC 4.2026, JCM 13277, NBRC 102073, S. rubidus, Streptomyces rubidus Xu et al. 2006, Streptomyces sp. 13c15, strain 13c15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.