Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEN08538.1 | SEN35953.1 | SAMN05216267_1001198 | SAMN05216267_1004116 | AMP-binding enzyme. | Acetyl esterase/lipase. | 0.915 |
SEN08538.1 | SEN89831.1 | SAMN05216267_1001198 | SAMN05216267_101287 | AMP-binding enzyme. | Glutamate mutase subunit E. | 0.999 |
SEN08538.1 | SEN89888.1 | SAMN05216267_1001198 | SAMN05216267_101290 | AMP-binding enzyme. | Amino acid adenylation domain-containing protein. | 0.999 |
SEN08538.1 | SEO14203.1 | SAMN05216267_1001198 | SAMN05216267_101896 | AMP-binding enzyme. | NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.973 |
SEN08538.1 | SEO14222.1 | SAMN05216267_1001198 | SAMN05216267_101897 | AMP-binding enzyme. | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.969 |
SEN08538.1 | SEO14238.1 | SAMN05216267_1001198 | SAMN05216267_101898 | AMP-binding enzyme. | NADH-quinone oxidoreductase subunit E. | 0.990 |
SEN08538.1 | SEO78679.1 | SAMN05216267_1001198 | SAMN05216267_10434 | AMP-binding enzyme. | NADH:ubiquinone oxidoreductase, NADH-binding subunit (chain F). | 0.969 |
SEN09959.1 | SEN35953.1 | SAMN05216267_1001263 | SAMN05216267_1004116 | Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. | Acetyl esterase/lipase. | 0.695 |
SEN09959.1 | SEN89831.1 | SAMN05216267_1001263 | SAMN05216267_101287 | Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. | Glutamate mutase subunit E. | 0.528 |
SEN35953.1 | SEN08538.1 | SAMN05216267_1004116 | SAMN05216267_1001198 | Acetyl esterase/lipase. | AMP-binding enzyme. | 0.915 |
SEN35953.1 | SEN09959.1 | SAMN05216267_1004116 | SAMN05216267_1001263 | Acetyl esterase/lipase. | Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. | 0.695 |
SEN35953.1 | SEN55201.1 | SAMN05216267_1004116 | SAMN05216267_1006226 | Acetyl esterase/lipase. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.667 |
SEN35953.1 | SEN89831.1 | SAMN05216267_1004116 | SAMN05216267_101287 | Acetyl esterase/lipase. | Glutamate mutase subunit E. | 0.688 |
SEN35953.1 | SEN89888.1 | SAMN05216267_1004116 | SAMN05216267_101290 | Acetyl esterase/lipase. | Amino acid adenylation domain-containing protein. | 0.753 |
SEN35953.1 | SEO14203.1 | SAMN05216267_1004116 | SAMN05216267_101896 | Acetyl esterase/lipase. | NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.588 |
SEN35953.1 | SEO14222.1 | SAMN05216267_1004116 | SAMN05216267_101897 | Acetyl esterase/lipase. | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.675 |
SEN35953.1 | SEO14238.1 | SAMN05216267_1004116 | SAMN05216267_101898 | Acetyl esterase/lipase. | NADH-quinone oxidoreductase subunit E. | 0.873 |
SEN35953.1 | SEO78679.1 | SAMN05216267_1004116 | SAMN05216267_10434 | Acetyl esterase/lipase. | NADH:ubiquinone oxidoreductase, NADH-binding subunit (chain F). | 0.675 |
SEN35953.1 | kynU | SAMN05216267_1004116 | SAMN05216267_102651 | Acetyl esterase/lipase. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.606 |
SEN55201.1 | SEN35953.1 | SAMN05216267_1006226 | SAMN05216267_1004116 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Acetyl esterase/lipase. | 0.667 |
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