STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN33832.1NitT/TauT family transport system permease protein. (318 aa)    
Predicted Functional Partners:
SEN33807.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.993
SEN33794.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.984
SEN15254.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.931
SEN37487.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.927
SEN79119.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.927
SEN79142.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.891
SEN33847.1
Sirohydrochlorin ferrochelatase.
       0.883
SEN15201.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.882
SEN37448.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.873
ssuB
Sulfonate transport system ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.848
Your Current Organism:
Streptomyces rubidus
NCBI taxonomy Id: 310780
Other names: CGMCC 4.2026, JCM 13277, NBRC 102073, S. rubidus, Streptomyces rubidus Xu et al. 2006, Streptomyces sp. 13c15, strain 13c15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.