STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN70647.1Ubiquinol-cytochrome c reductase cytochrome b subunit. (554 aa)    
Predicted Functional Partners:
SEN70671.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit.
 
 0.999
SEN70678.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
 
 0.999
SEN70697.1
Cytochrome c oxidase subunit 3.
 
 0.999
SEN70754.1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
 0.999
SEN70768.1
Cytochrome c oxidase subunit 2.
 
 0.999
SEN70738.1
Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
 
 
 0.996
SEN67020.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
 
 0.996
SEN62044.1
Right handed beta helix region.
  
 0.958
SEO13661.1
NADH dehydrogenase subunit M.
   
 
 0.943
SEO14117.1
NADH dehydrogenase subunit M.
   
 
 0.943
Your Current Organism:
Streptomyces rubidus
NCBI taxonomy Id: 310780
Other names: CGMCC 4.2026, JCM 13277, NBRC 102073, S. rubidus, Streptomyces rubidus Xu et al. 2006, Streptomyces sp. 13c15, strain 13c15
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