STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN67254.1TerD domain-containing protein. (682 aa)    
Predicted Functional Partners:
SEN67278.1
Tellurium resistance protein TerZ.
 
     0.899
SEN67226.1
Tellurite resistance protein TerC.
  
  
 0.820
SEN29365.1
Citrate lyase beta subunit.
 
     0.808
SEN29416.1
Hydroxymethylpyrimidine pyrophosphatase.
 
     0.803
SEN29271.1
Uncharacterized protein involved in tellurium resistance.
 
    0.790
SEN29385.1
PELOTA RNA binding domain-containing protein.
 
     0.784
SEN51345.1
Stress response protein SCP2.
  
     0.743
SEO90002.1
Tetratricopeptide repeat-containing protein.
  
     0.717
SEN29470.1
Hypothetical protein.
  
     0.686
SEN46687.1
Hypothetical protein.
  
     0.671
Your Current Organism:
Streptomyces rubidus
NCBI taxonomy Id: 310780
Other names: CGMCC 4.2026, JCM 13277, NBRC 102073, S. rubidus, Streptomyces rubidus Xu et al. 2006, Streptomyces sp. 13c15, strain 13c15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.