STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN67707.1Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family. (238 aa)    
Predicted Functional Partners:
SEN67755.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SEN67790.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
SEN67730.1
Branched-chain amino acid transport system ATP-binding protein.
 
 
0.996
SEN67817.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.996
SEO68762.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.994
SEO68786.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.988
SEO68839.1
Branched-chain amino acid transport system substrate-binding protein.
 
 
 0.969
SEO68818.1
Branched-chain amino acid transport system ATP-binding protein.
 
 
0.932
SEO68804.1
Branched-chain amino acid transport system ATP-binding protein.
  
  
 
0.903
SEN08090.1
Substrate-binding protein.
  
 
 0.898
Your Current Organism:
Streptomyces rubidus
NCBI taxonomy Id: 310780
Other names: CGMCC 4.2026, JCM 13277, NBRC 102073, S. rubidus, Streptomyces rubidus Xu et al. 2006, Streptomyces sp. 13c15, strain 13c15
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