Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEN34544.1 | SEN89170.1 | SAMN05216267_100447 | SAMN05216267_101251 | Protein of unknown function. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.413 |
SEN34544.1 | SEN89188.1 | SAMN05216267_100447 | SAMN05216267_101252 | Protein of unknown function. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.413 |
SEN43159.1 | SEN89170.1 | SAMN05216267_100587 | SAMN05216267_101251 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.403 |
SEN43159.1 | SEN89188.1 | SAMN05216267_100587 | SAMN05216267_101252 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.403 |
SEN50628.1 | SEN89170.1 | SAMN05216267_100644 | SAMN05216267_101251 | Mycothiol system anti-sigma-R factor. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.463 |
SEN50628.1 | SEN89188.1 | SAMN05216267_100644 | SAMN05216267_101252 | Mycothiol system anti-sigma-R factor. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.429 |
SEN50628.1 | SEO25475.1 | SAMN05216267_100644 | SAMN05216267_102151 | Mycothiol system anti-sigma-R factor. | Putative zinc-finger. | 0.405 |
SEN52722.1 | SEN89170.1 | SAMN05216267_1006127 | SAMN05216267_101251 | Putative zinc-finger. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.403 |
SEN52722.1 | SEN89188.1 | SAMN05216267_1006127 | SAMN05216267_101252 | Putative zinc-finger. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.403 |
SEN89126.1 | SEN89170.1 | SAMN05216267_101249 | SAMN05216267_101251 | Ubiquinol-cytochrome c reductase cytochrome b subunit. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.486 |
SEN89126.1 | whiB-5 | SAMN05216267_101249 | SAMN05216267_101250 | Ubiquinol-cytochrome c reductase cytochrome b subunit. | WhiB family transcriptional regulator, redox-sensing transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.724 |
SEN89170.1 | SEN34544.1 | SAMN05216267_101251 | SAMN05216267_100447 | RNA polymerase sigma-70 factor, ECF subfamily. | Protein of unknown function. | 0.413 |
SEN89170.1 | SEN43159.1 | SAMN05216267_101251 | SAMN05216267_100587 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.403 |
SEN89170.1 | SEN50628.1 | SAMN05216267_101251 | SAMN05216267_100644 | RNA polymerase sigma-70 factor, ECF subfamily. | Mycothiol system anti-sigma-R factor. | 0.463 |
SEN89170.1 | SEN52722.1 | SAMN05216267_101251 | SAMN05216267_1006127 | RNA polymerase sigma-70 factor, ECF subfamily. | Putative zinc-finger. | 0.403 |
SEN89170.1 | SEN89126.1 | SAMN05216267_101251 | SAMN05216267_101249 | RNA polymerase sigma-70 factor, ECF subfamily. | Ubiquinol-cytochrome c reductase cytochrome b subunit. | 0.486 |
SEN89170.1 | SEN89188.1 | SAMN05216267_101251 | SAMN05216267_101252 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.858 |
SEN89170.1 | SEO25475.1 | SAMN05216267_101251 | SAMN05216267_102151 | RNA polymerase sigma-70 factor, ECF subfamily. | Putative zinc-finger. | 0.413 |
SEN89170.1 | whiB-5 | SAMN05216267_101251 | SAMN05216267_101250 | RNA polymerase sigma-70 factor, ECF subfamily. | WhiB family transcriptional regulator, redox-sensing transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.592 |
SEN89188.1 | SEN34544.1 | SAMN05216267_101252 | SAMN05216267_100447 | RNA polymerase sigma-70 factor, ECF subfamily. | Protein of unknown function. | 0.413 |
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