Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEN19246.1 | SEN19268.1 | SAMN05216267_1002225 | SAMN05216267_1002226 | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family. | 5-deoxyglucuronate isomerase. | 0.999 |
SEN19246.1 | SEN19325.1 | SAMN05216267_1002225 | SAMN05216267_1002229 | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family. | Inosose dehydratase. | 0.998 |
SEN19246.1 | SEO26523.1 | SAMN05216267_1002225 | SAMN05216267_1021112 | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family. | Predicted dehydrogenase. | 0.595 |
SEN19268.1 | SEN19246.1 | SAMN05216267_1002226 | SAMN05216267_1002225 | 5-deoxyglucuronate isomerase. | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family. | 0.999 |
SEN19268.1 | SEN19325.1 | SAMN05216267_1002226 | SAMN05216267_1002229 | 5-deoxyglucuronate isomerase. | Inosose dehydratase. | 0.985 |
SEN19268.1 | SEO26523.1 | SAMN05216267_1002226 | SAMN05216267_1021112 | 5-deoxyglucuronate isomerase. | Predicted dehydrogenase. | 0.580 |
SEN19325.1 | SEN19246.1 | SAMN05216267_1002229 | SAMN05216267_1002225 | Inosose dehydratase. | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family. | 0.998 |
SEN19325.1 | SEN19268.1 | SAMN05216267_1002229 | SAMN05216267_1002226 | Inosose dehydratase. | 5-deoxyglucuronate isomerase. | 0.985 |
SEN19325.1 | SEO26523.1 | SAMN05216267_1002229 | SAMN05216267_1021112 | Inosose dehydratase. | Predicted dehydrogenase. | 0.584 |
SEN39322.1 | SEO26523.1 | SAMN05216267_1004281 | SAMN05216267_1021112 | DegT/DnrJ/EryC1/StrS aminotransferase family protein. | Predicted dehydrogenase. | 0.607 |
SEO07218.1 | SEO07256.1 | SAMN05216267_1016149 | SAMN05216267_1016151 | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | Perosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | 0.826 |
SEO07218.1 | SEO26523.1 | SAMN05216267_1016149 | SAMN05216267_1021112 | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | Predicted dehydrogenase. | 0.700 |
SEO07256.1 | SEO07218.1 | SAMN05216267_1016151 | SAMN05216267_1016149 | Perosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.826 |
SEO07256.1 | SEO26523.1 | SAMN05216267_1016151 | SAMN05216267_1021112 | Perosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | Predicted dehydrogenase. | 0.652 |
SEO15311.1 | SEO26523.1 | SAMN05216267_1018152 | SAMN05216267_1021112 | ATP-grasp ribosomal peptide maturase, SAV_5884 family. | Predicted dehydrogenase. | 0.603 |
SEO26492.1 | SEO26504.1 | SAMN05216267_1021110 | SAMN05216267_1021111 | L-glutamine synthetase. | 5-carboxymethyl-2-hydroxymuconate isomerase. | 0.475 |
SEO26492.1 | SEO26523.1 | SAMN05216267_1021110 | SAMN05216267_1021112 | L-glutamine synthetase. | Predicted dehydrogenase. | 0.761 |
SEO26504.1 | SEO26492.1 | SAMN05216267_1021111 | SAMN05216267_1021110 | 5-carboxymethyl-2-hydroxymuconate isomerase. | L-glutamine synthetase. | 0.475 |
SEO26504.1 | SEO26523.1 | SAMN05216267_1021111 | SAMN05216267_1021112 | 5-carboxymethyl-2-hydroxymuconate isomerase. | Predicted dehydrogenase. | 0.878 |
SEO26523.1 | SEN19246.1 | SAMN05216267_1021112 | SAMN05216267_1002225 | Predicted dehydrogenase. | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family. | 0.595 |
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