Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEN34505.1 | SEO15645.1 | SAMN05216267_100445 | SAMN05216267_1018167 | Chlorite dismutase. | uroporphyrinogen-III synthase. | 0.420 |
SEN34505.1 | SEO26904.1 | SAMN05216267_100445 | SAMN05216267_1021134 | Chlorite dismutase. | Phytoene dehydrogenase-related protein. | 0.611 |
SEN34505.1 | hemE | SAMN05216267_100445 | SAMN05216267_100448 | Chlorite dismutase. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.690 |
SEN34505.1 | hemH | SAMN05216267_100445 | SAMN05216267_1004146 | Chlorite dismutase. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.989 |
SEN58549.1 | SEO26904.1 | SAMN05216267_100710 | SAMN05216267_1021134 | Predicted amidophosphoribosyltransferases. | Phytoene dehydrogenase-related protein. | 0.615 |
SEN59454.1 | SEO15645.1 | SAMN05216267_100745 | SAMN05216267_1018167 | uroporphyrinogen-III synthase. | uroporphyrinogen-III synthase. | 0.946 |
SEN59454.1 | SEO26904.1 | SAMN05216267_100745 | SAMN05216267_1021134 | uroporphyrinogen-III synthase. | Phytoene dehydrogenase-related protein. | 0.549 |
SEN59454.1 | hemE | SAMN05216267_100745 | SAMN05216267_100448 | uroporphyrinogen-III synthase. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.939 |
SEN59454.1 | hemH | SAMN05216267_100745 | SAMN05216267_1004146 | uroporphyrinogen-III synthase. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.503 |
SEN69696.1 | SEO26904.1 | SAMN05216267_1008156 | SAMN05216267_1021134 | Phytoene desaturase. | Phytoene dehydrogenase-related protein. | 0.653 |
SEN69696.1 | SEO75712.1 | SAMN05216267_1008156 | SAMN05216267_104060 | Phytoene desaturase. | Protoporphyrin IX magnesium-chelatase. | 0.696 |
SEN69696.1 | SEO85263.1 | SAMN05216267_1008156 | SAMN05216267_104740 | Phytoene desaturase. | Farnesyl-diphosphate farnesyltransferase. | 0.817 |
SEO15645.1 | SEN34505.1 | SAMN05216267_1018167 | SAMN05216267_100445 | uroporphyrinogen-III synthase. | Chlorite dismutase. | 0.420 |
SEO15645.1 | SEN59454.1 | SAMN05216267_1018167 | SAMN05216267_100745 | uroporphyrinogen-III synthase. | uroporphyrinogen-III synthase. | 0.946 |
SEO15645.1 | SEO26904.1 | SAMN05216267_1018167 | SAMN05216267_1021134 | uroporphyrinogen-III synthase. | Phytoene dehydrogenase-related protein. | 0.628 |
SEO15645.1 | SEO75712.1 | SAMN05216267_1018167 | SAMN05216267_104060 | uroporphyrinogen-III synthase. | Protoporphyrin IX magnesium-chelatase. | 0.608 |
SEO15645.1 | hemE | SAMN05216267_1018167 | SAMN05216267_100448 | uroporphyrinogen-III synthase. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.948 |
SEO15645.1 | hemH | SAMN05216267_1018167 | SAMN05216267_1004146 | uroporphyrinogen-III synthase. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.573 |
SEO26878.1 | SEO26904.1 | SAMN05216267_1021133 | SAMN05216267_1021134 | Hypothetical protein. | Phytoene dehydrogenase-related protein. | 0.789 |
SEO26878.1 | hemH | SAMN05216267_1021133 | SAMN05216267_1004146 | Hypothetical protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.462 |
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