Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEN11220.1 | SEO44144.1 | SAMN05216267_1001320 | SAMN05216267_1026102 | RHS repeat-associated core domain-containing protein. | Predicted metal-dependent peptidase. | 0.498 |
SEN11220.1 | SEO44162.1 | SAMN05216267_1001320 | SAMN05216267_1026103 | RHS repeat-associated core domain-containing protein. | AAA domain (dynein-related subfamily). | 0.436 |
SEN11220.1 | SEO44184.1 | SAMN05216267_1001320 | SAMN05216267_1026104 | RHS repeat-associated core domain-containing protein. | Hypothetical protein. | 0.640 |
SEN11220.1 | SEO59209.1 | SAMN05216267_1001320 | SAMN05216267_10324 | RHS repeat-associated core domain-containing protein. | Zn-dependent protease with chaperone function. | 0.508 |
SEN16481.1 | SEO35976.1 | SAMN05216267_1002103 | SAMN05216267_102465 | HEXXH motif-containing protein. | Pectate lyase superfamily protein. | 0.414 |
SEN16481.1 | SEO44144.1 | SAMN05216267_1002103 | SAMN05216267_1026102 | HEXXH motif-containing protein. | Predicted metal-dependent peptidase. | 0.630 |
SEN16481.1 | SEO44162.1 | SAMN05216267_1002103 | SAMN05216267_1026103 | HEXXH motif-containing protein. | AAA domain (dynein-related subfamily). | 0.621 |
SEN16481.1 | SEO44184.1 | SAMN05216267_1002103 | SAMN05216267_1026104 | HEXXH motif-containing protein. | Hypothetical protein. | 0.483 |
SEN16481.1 | SEO59195.1 | SAMN05216267_1002103 | SAMN05216267_10323 | HEXXH motif-containing protein. | Hypothetical protein. | 0.647 |
SEN16481.1 | SEO59209.1 | SAMN05216267_1002103 | SAMN05216267_10324 | HEXXH motif-containing protein. | Zn-dependent protease with chaperone function. | 0.407 |
SEN17552.1 | SEO44144.1 | SAMN05216267_1002147 | SAMN05216267_1026102 | RHS repeat-associated core domain-containing protein. | Predicted metal-dependent peptidase. | 0.514 |
SEN17552.1 | SEO44162.1 | SAMN05216267_1002147 | SAMN05216267_1026103 | RHS repeat-associated core domain-containing protein. | AAA domain (dynein-related subfamily). | 0.443 |
SEN17552.1 | SEO44184.1 | SAMN05216267_1002147 | SAMN05216267_1026104 | RHS repeat-associated core domain-containing protein. | Hypothetical protein. | 0.653 |
SEN17552.1 | SEO59209.1 | SAMN05216267_1002147 | SAMN05216267_10324 | RHS repeat-associated core domain-containing protein. | Zn-dependent protease with chaperone function. | 0.520 |
SEO35976.1 | SEN16481.1 | SAMN05216267_102465 | SAMN05216267_1002103 | Pectate lyase superfamily protein. | HEXXH motif-containing protein. | 0.414 |
SEO35976.1 | SEO44144.1 | SAMN05216267_102465 | SAMN05216267_1026102 | Pectate lyase superfamily protein. | Predicted metal-dependent peptidase. | 0.503 |
SEO35976.1 | SEO44162.1 | SAMN05216267_102465 | SAMN05216267_1026103 | Pectate lyase superfamily protein. | AAA domain (dynein-related subfamily). | 0.464 |
SEO35976.1 | SEO44184.1 | SAMN05216267_102465 | SAMN05216267_1026104 | Pectate lyase superfamily protein. | Hypothetical protein. | 0.578 |
SEO44108.1 | SEO44124.1 | SAMN05216267_1026100 | SAMN05216267_1026101 | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.773 |
SEO44108.1 | SEO44144.1 | SAMN05216267_1026100 | SAMN05216267_1026102 | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | Predicted metal-dependent peptidase. | 0.476 |
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