Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEN17978.1 | SEO64917.1 | SAMN05216267_1002166 | SAMN05216267_103444 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.595 |
SEO40784.1 | SEO64917.1 | SAMN05216267_1025110 | SAMN05216267_103444 | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.740 |
SEO40784.1 | SEO99549.1 | SAMN05216267_1025110 | SAMN05216267_106618 | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family. | 0.634 |
SEO64908.1 | SEO64917.1 | SAMN05216267_103443 | SAMN05216267_103444 | 4-oxalocrotonate tautomerase. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.814 |
SEO64917.1 | SEN17978.1 | SAMN05216267_103444 | SAMN05216267_1002166 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.595 |
SEO64917.1 | SEO40784.1 | SAMN05216267_103444 | SAMN05216267_1025110 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.740 |
SEO64917.1 | SEO64908.1 | SAMN05216267_103444 | SAMN05216267_103443 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 4-oxalocrotonate tautomerase. | 0.814 |
SEO64917.1 | SEO64941.1 | SAMN05216267_103444 | SAMN05216267_103445 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.451 |
SEO64917.1 | SEO99549.1 | SAMN05216267_103444 | SAMN05216267_106618 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family. | 0.746 |
SEO64941.1 | SEO64917.1 | SAMN05216267_103445 | SAMN05216267_103444 | Hypothetical protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.451 |
SEO99549.1 | SEO40784.1 | SAMN05216267_106618 | SAMN05216267_1025110 | Regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.634 |
SEO99549.1 | SEO64917.1 | SAMN05216267_106618 | SAMN05216267_103444 | Regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.746 |