Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEN16639.1 | SEO19345.1 | SAMN05216267_1002109 | SAMN05216267_1019125 | Serine protease. | Parallel beta-helix repeat (two copies). | 0.720 |
SEN16639.1 | SEO81109.1 | SAMN05216267_1002109 | SAMN05216267_10455 | Serine protease. | Major Facilitator Superfamily protein. | 0.457 |
SEN16639.1 | SEO86297.1 | SAMN05216267_1002109 | SAMN05216267_104830 | Serine protease. | TIGR03083 family protein. | 0.403 |
SEN96062.1 | SEO81109.1 | SAMN05216267_10141 | SAMN05216267_10455 | Kumamolisin. | Major Facilitator Superfamily protein. | 0.445 |
SEO05833.1 | SEO19345.1 | SAMN05216267_101673 | SAMN05216267_1019125 | Glycosyl hydrolases family 8. | Parallel beta-helix repeat (two copies). | 0.738 |
SEO05833.1 | SEO81109.1 | SAMN05216267_101673 | SAMN05216267_10455 | Glycosyl hydrolases family 8. | Major Facilitator Superfamily protein. | 0.452 |
SEO09566.1 | SEO81109.1 | SAMN05216267_101750 | SAMN05216267_10455 | Winged helix-turn-helix DNA-binding. | Major Facilitator Superfamily protein. | 0.437 |
SEO19345.1 | SEN16639.1 | SAMN05216267_1019125 | SAMN05216267_1002109 | Parallel beta-helix repeat (two copies). | Serine protease. | 0.720 |
SEO19345.1 | SEO05833.1 | SAMN05216267_1019125 | SAMN05216267_101673 | Parallel beta-helix repeat (two copies). | Glycosyl hydrolases family 8. | 0.738 |
SEO19345.1 | SEO81109.1 | SAMN05216267_1019125 | SAMN05216267_10455 | Parallel beta-helix repeat (two copies). | Major Facilitator Superfamily protein. | 0.421 |
SEO23619.1 | SEO81109.1 | SAMN05216267_1020164 | SAMN05216267_10455 | Kumamolisin. | Major Facilitator Superfamily protein. | 0.445 |
SEO81109.1 | SEN16639.1 | SAMN05216267_10455 | SAMN05216267_1002109 | Major Facilitator Superfamily protein. | Serine protease. | 0.457 |
SEO81109.1 | SEN96062.1 | SAMN05216267_10455 | SAMN05216267_10141 | Major Facilitator Superfamily protein. | Kumamolisin. | 0.445 |
SEO81109.1 | SEO05833.1 | SAMN05216267_10455 | SAMN05216267_101673 | Major Facilitator Superfamily protein. | Glycosyl hydrolases family 8. | 0.452 |
SEO81109.1 | SEO09566.1 | SAMN05216267_10455 | SAMN05216267_101750 | Major Facilitator Superfamily protein. | Winged helix-turn-helix DNA-binding. | 0.437 |
SEO81109.1 | SEO19345.1 | SAMN05216267_10455 | SAMN05216267_1019125 | Major Facilitator Superfamily protein. | Parallel beta-helix repeat (two copies). | 0.421 |
SEO81109.1 | SEO23619.1 | SAMN05216267_10455 | SAMN05216267_1020164 | Major Facilitator Superfamily protein. | Kumamolisin. | 0.445 |
SEO81109.1 | SEO81128.1 | SAMN05216267_10455 | SAMN05216267_10456 | Major Facilitator Superfamily protein. | DNA-binding transcriptional regulator, ArsR family. | 0.801 |
SEO81109.1 | SEO86297.1 | SAMN05216267_10455 | SAMN05216267_104830 | Major Facilitator Superfamily protein. | TIGR03083 family protein. | 0.527 |
SEO81109.1 | SEO90160.1 | SAMN05216267_10455 | SAMN05216267_105314 | Major Facilitator Superfamily protein. | Pectate lyase superfamily protein. | 0.490 |
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