Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEN08538.1 | SEN89831.1 | SAMN05216267_1001198 | SAMN05216267_101287 | AMP-binding enzyme. | Glutamate mutase subunit E. | 0.999 |
SEN08538.1 | SEO22487.1 | SAMN05216267_1001198 | SAMN05216267_102096 | AMP-binding enzyme. | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.490 |
SEN08538.1 | SEO25169.1 | SAMN05216267_1001198 | SAMN05216267_102135 | AMP-binding enzyme. | Ribosomal protein RSM22 (predicted rRNA methylase). | 0.406 |
SEN08538.1 | SEO43965.1 | SAMN05216267_1001198 | SAMN05216267_102693 | AMP-binding enzyme. | Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.490 |
SEN08538.1 | SEO87899.1 | SAMN05216267_1001198 | SAMN05216267_105012 | AMP-binding enzyme. | Glyoxylase, beta-lactamase superfamily II. | 0.965 |
SEN08538.1 | SEO94095.1 | SAMN05216267_1001198 | SAMN05216267_105811 | AMP-binding enzyme. | Rhodanese-related sulfurtransferase. | 0.498 |
SEN08538.1 | rpsQ | SAMN05216267_1001198 | SAMN05216267_101812 | AMP-binding enzyme. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.961 |
SEN08538.1 | rsmH | SAMN05216267_1001198 | SAMN05216267_1008145 | AMP-binding enzyme. | 16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.429 |
SEN08538.1 | ybeY | SAMN05216267_1001198 | SAMN05216267_1003142 | AMP-binding enzyme. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.961 |
SEN89831.1 | SEN08538.1 | SAMN05216267_101287 | SAMN05216267_1001198 | Glutamate mutase subunit E. | AMP-binding enzyme. | 0.999 |
SEN89831.1 | SEO22487.1 | SAMN05216267_101287 | SAMN05216267_102096 | Glutamate mutase subunit E. | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.541 |
SEN89831.1 | SEO43965.1 | SAMN05216267_101287 | SAMN05216267_102693 | Glutamate mutase subunit E. | Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.541 |
SEN89831.1 | SEO87899.1 | SAMN05216267_101287 | SAMN05216267_105012 | Glutamate mutase subunit E. | Glyoxylase, beta-lactamase superfamily II. | 0.893 |
SEN89831.1 | SEO94095.1 | SAMN05216267_101287 | SAMN05216267_105811 | Glutamate mutase subunit E. | Rhodanese-related sulfurtransferase. | 0.663 |
SEN89831.1 | rpsQ | SAMN05216267_101287 | SAMN05216267_101812 | Glutamate mutase subunit E. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.527 |
SEN89831.1 | rsmH | SAMN05216267_101287 | SAMN05216267_1008145 | Glutamate mutase subunit E. | 16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.409 |
SEN89831.1 | truA | SAMN05216267_101287 | SAMN05216267_10853 | Glutamate mutase subunit E. | tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.467 |
SEN89831.1 | ybeY | SAMN05216267_101287 | SAMN05216267_1003142 | Glutamate mutase subunit E. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.436 |
SEO22487.1 | SEN08538.1 | SAMN05216267_102096 | SAMN05216267_1001198 | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | AMP-binding enzyme. | 0.490 |
SEO22487.1 | SEN89831.1 | SAMN05216267_102096 | SAMN05216267_101287 | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Glutamate mutase subunit E. | 0.541 |
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