STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO87909.1Pimeloyl-ACP methyl ester carboxylesterase. (288 aa)    
Predicted Functional Partners:
SEP08897.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.769
SEO87929.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.731
SEN89888.1
Amino acid adenylation domain-containing protein.
   
 0.700
SEN09991.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.699
SEO52496.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.698
SEO29396.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.695
SEN08538.1
AMP-binding enzyme.
   
 0.678
SEO64359.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.668
SEO10053.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
   
  0.657
SEP00796.1
S-(hydroxymethyl)mycothiol dehydrogenase.
   
  0.657
Your Current Organism:
Streptomyces rubidus
NCBI taxonomy Id: 310780
Other names: CGMCC 4.2026, JCM 13277, NBRC 102073, S. rubidus, Streptomyces rubidus Xu et al. 2006, Streptomyces sp. 13c15, strain 13c15
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